Insertion junction: CLIP2.071513_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071513
Chromosome:chromosome 16
Location:6123696
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g677250 TEH5 (1 of 6) 3.1.2.2 - Palmitoyl-CoA hydrolase / Long-chain fatty-acyl-CoA hydrolase; Thioesterase-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTATGTATCATTATCGTTGAAAGCCCGGACAGAAATCAACCTTGCC
Internal bar code:CTAATGACACCAGCTAATGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:61
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAAGCGACGAAGCCACCT
Suggested primer 2:CCTTGCATCCTCCCTCGTTT