Insertion junction: CLIP2.071514_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071514
Chromosome:chromosome 6
Location:5505912
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTAATACATTTCATGCATAGCCGCTTGCAATACCGCTGGCCTAACTC
Internal bar code:TTTTTAATAGGGAGGAACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2594
LEAP-Seq percent confirming:98.9691
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAGGAAGTGAGGAGG
Suggested primer 2:CTGACGGAGGAGGAGATTGC