Insertion junction: CLIP2.071517_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071517
Chromosome:chromosome 9
Location:5759575
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g410850 NAR3,NRT2A High affinity nitrate/nitrite transporter; (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGCCGCGCGAGGGCGCCGAGGAGGAGGACTACTACATGCGCGAGTG
Internal bar code:ACAGTTGAGGCATTTGTGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGGATGGCCCTAATACC
Suggested primer 2:CAGTTTGGCCTCAACCTTGC