Insertion junction: CLIP2.071521_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071521
Chromosome:chromosome 13
Location:3909698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACATTTATGTTCTACCCACCTTCGGAGCATGCAGGAGGTGAACCCGG
Internal bar code:GTTGCTGGTGGGAGAAGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5383
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTACACTCCCGTAGATGC
Suggested primer 2:CCATGCTAATGTCAAGCGCC