Insertion junction: CLIP2.071522_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071522
Chromosome:chromosome 1
Location:5164807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036050 MLH1 DNA mismatch repair protein; (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCTTGTCAAGGACATCCCGCCAAGTTTTCATTGCCCTAGCTGCGATT
Internal bar code:CCGGTCTGGCGGGGCTATACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAATGGCGAGGTCCTCT
Suggested primer 2:TGAAAACTCCCGTCGTCAGG