Insertion junction: CLIP2.071531_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071531
Chromosome:chromosome 2
Location:7067871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389986 (1 of 17) IPR029069 - HotDog domain mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCGCCCGCCATGTGTCTAGCCACATCCCGCTGTCAAGATAAGCACAG
Internal bar code:GTTAGCTAGGGTCGACATTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5197
LEAP-Seq percent confirming:92.5373
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:134

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTGCTGGTTGTGACTA
Suggested primer 2:CAAATATGAGGCGCCAGTGC