Insertion junction: CLIP2.071536_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071536
Chromosome:chromosome 10
Location:6746786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g467100 (1 of 1) PTHR31633//PTHR31633:SF1 - FAMILY NOT NAMED // H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAATACATGTCAGCTAAGGCGTGTGTCCTTGCTAAGCGTGGCAACCGTG
Internal bar code:CATGTCTACGACTTGCGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:19.3548
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTGCAACCTTCATGC
Suggested primer 2:CGGCAGGGAGTTTTGTGTTG