Insertion junction: CLIP2.071541_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071541
Chromosome:chromosome 16
Location:1034775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649150 (1 of 1) PF13414//PF13920 - TPR repeat (TPR_11) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCTGTTACCACTACACTTACATTGTGCCCCCTCGCCCAGCTTCGACC
Internal bar code:GCAGCCGGATCGACGTCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCATTCCACTGGTAAGCC
Suggested primer 2:AGAACTTGTAAGCGGCGTCA