Insertion junction: CLIP2.071541_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071541
Chromosome:chromosome 16
Location:1034779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649150 (1 of 1) PF13414//PF13920 - TPR repeat (TPR_11) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGCTATATGCACTGTTATTCGTCTATGTGGGCGGAAACCAGCGGCT
Internal bar code:AAACGGTAGAATAGTGAACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1126
LEAP-Seq percent confirming:53.125
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACTTGTAAGCGGCGTCA
Suggested primer 2:AGGCATTCCACTGGTAAGCC