Insertion junction: CLIP2.071542_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071542
Chromosome:chromosome 7
Location:999648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319500 (1 of 2) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase 5'UTR
Cre07.g319550 (1 of 1) PF10442 - FIST C domain (FIST_C) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTTGCTAGGCGTGTCGGTACTCCGTGCTCTGCATATGCCAAAGCGC
Internal bar code:TCACAGTCCAGAAACAGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:975
LEAP-Seq percent confirming:76.0563
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTTGCGAGAGATGTGT
Suggested primer 2:CGGGGCAGGAGAACTCAATT