Insertion junction: CLIP2.071551_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071551
Chromosome:chromosome 1
Location:3208772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020575 HSP22D (1 of 4) PTHR11527//PTHR11527:SF128 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED; Heat shock protein 22D 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTCAGTTTGCCTCAAGCTTACCCCACCACAAACACCATGGCCCTTA
Internal bar code:TGTTATCCGTGAAGAATCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1518
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTCACGAATTCGGCAA
Suggested primer 2:GCCTCATCAGAGTGGCAAGT