Insertion junction: CLIP2.071557_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071557
Chromosome:chromosome 6
Location:6823923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296300 SRR1 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain 5'UTR
Cre06.g296350 SENP5,ULP1 ULP2-type SUMO protease; (1 of 5) 3.4.22.68 - Ulp1 peptidase / Ulp1 protease 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGAATATGTATATGGGCTTATAAACAGTGACTCAGACGCCCACCAGGA
Internal bar code:AGTTTGCAGCGGTCGATAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTTGTATGCCTGATGC
Suggested primer 2:CTATCGCGACAAGCTGCAAC