Insertion junction: CLIP2.071565_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071565
Chromosome:chromosome 3
Location:403072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144827 MIA40 Mitochondrial intermembrane space protein 40; (1 of 1) IPR012891//IPR015360 - GCK // XPC-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAACCCACTAGTGCCCGGCCCATCCTCCTCCTCTTCCCTAGACCCCC
Internal bar code:AAGGGACAAGGTCCGGGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1602
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCAGGCATTCATGGACT
Suggested primer 2:TGGCTTGTCGTGAGAGAACC