Insertion junction: CLIP2.071577_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071577
Chromosome:chromosome 6
Location:7388068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300144 3'UTR
Cre06.g300150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTCTCTCTCCCAACACAAATGCACCGTGTTTACTACGCTATTTGCG
Internal bar code:AGCACCTAGACGCAGCAGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3581
LEAP-Seq percent confirming:53.9823
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:AAAATGCATCTTACGGCGCC
Suggested primer 2:AAGGCGCCACATGTTATCCA