Insertion junction: CLIP2.071581_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071581
Chromosome:chromosome 10
Location:2199387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433600 (1 of 1) 1.5.1.20 - Methylenetetrahydrofolate reductase (NAD(P)H) / N(5,10)-methylenetetrahydrofolate reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGAGGACACGTGCGTGGGGATCTCGTGACCCGTCAGCGGTGTGAAC
Internal bar code:CAGAAACTCTGGACGTTTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCTGTAGTTTGTGTGG
Suggested primer 2:GCACTACCCAGACACAACGA