Insertion junction: CLIP2.071590_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071590
Chromosome:chromosome 17
Location:796119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701500 DNJ1 (1 of 1) K09503 - DnaJ homolog subfamily A member 2 (DNAJA2); DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCCGAGGGAATGGGCCGCGCCTCGGCCCTAGAAGCGCCGCGAAGCCC
Internal bar code:TATACTTCTCTGGTGGATCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1473
LEAP-Seq percent confirming:55.3846
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TAATAGTCGCTGGCTCGCTG
Suggested primer 2:CGTAGGCCTCGTTGATCTCC