Insertion junction: CLIP2.071592_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071592
Chromosome:chromosome 10
Location:2836885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439050 MITC7,MCP7 (1 of 4) K14684 - solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 (SLC25A23S); Mitochondrial substrate carrier protein 5'UTR
Cre10.g439100 CCT1 T-complex protein 1, alpha subunit; (1 of 1) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAAGAACAAGTCGTGCTTGGGTTTGTGGGCTGAACACATGATATAAA
Internal bar code:TGAAACCGGAGCCGAATGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAATGTCGTCCACCAG
Suggested primer 2:AACCTTTTGAATGGCACGCC