Insertion junction: CLIP2.071596_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071596
Chromosome:chromosome 11
Location:1349699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTCTCTCTCTCTTCCAACAGAAAGCTCGCTAGAACCCCCTCGCACG
Internal bar code:CATAGAATCGGAGTTGTGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1766
LEAP-Seq percent confirming:74.026
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTTGACGGCGTGTGTGA
Suggested primer 2:CGGGCTGACCACTACGATAC