Insertion junction: CLIP2.071596_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071596
Chromosome:chromosome 11
Location:1349703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGAGCATCTTTTGAAGGGCCTAGTCCCGGGGTTGGCACATTAGTCAG
Internal bar code:CAGGTAGTCTTATCTGGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTGACCACTACGATAC
Suggested primer 2:GTTTTTGACGGCGTGTGTGA