Insertion junction: CLIP2.071606_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071606
Chromosome:chromosome 1
Location:4448204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030400 5'UTR
Cre01.g030450 (1 of 1) IPR006615//IPR028881//IPR028889//IPR029071 - Peptidase C19, ubiquitin-specific peptidase, DUSP domain // PAN2 domain // Ubiquitin specific protease domain // Ubiquitin-related domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAATGGGCGCAGCCAAAATCGAACACATACACAGCTCAACGCAACCG
Internal bar code:ATTGGGTTCAAGTAACGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAACTGTTCACCAGGCC
Suggested primer 2:TAGCGAGGGGATGGAGAACA