Insertion junction: CLIP2.071607_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071607
Chromosome:chromosome 1
Location:5402435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800095 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGATGGGGTCAATCCACTACTACATACTGACCAGCCGCAAGTGCTGC
Internal bar code:TTTACCTACAGATCAGGCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2080
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCAAGCCTGTCGTTGT
Suggested primer 2:CGGGTGTAAAACAGGTCGGA