Insertion junction: CLIP2.071610_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071610
Chromosome:chromosome 1
Location:1502315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008100 (1 of 34) IPR000571 - Zinc finger, CCCH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAAATGCGATCATCAGTACCGGAGAATGCACGCACACACACACACAC
Internal bar code:ACGCGATGGTTTAGGGGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2506
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTATGCTAGCGAGGAG
Suggested primer 2:CCCTAGCAACAGATAGGCCG