Insertion junction: CLIP2.071639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071639
Chromosome:chromosome 3
Location:2834847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162150 (1 of 26) IPR016177 - DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGATGAAGCATCAAGTCGGGCTCCCTACAGGATACGCGAGAGTCAAAC
Internal bar code:TGGACCTTTCAGCCATTTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGGTGTGAACTTTGAAG
Suggested primer 2:GGGTGAACGATTTCGGACCT