Insertion junction: CLIP2.071647_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071647
Chromosome:chromosome 12
Location:9789237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549002 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATATGCAGGGCATGGCTCGGTTGGTCTCAGATTGCATTGGTCTCAGA
Internal bar code:TGTAGTTGCTACCAAGTGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:35.4167
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GACACAAATGTTTGGCGGCT
Suggested primer 2:GGTTTGAGCAGCAACACAGG