Insertion junction: CLIP2.071652_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071652
Chromosome:chromosome 3
Location:1970728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155550 DNJ18 (1 of 1) IPR001623//IPR012336 - DnaJ domain // Thioredoxin-like fold; DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACTGCGCGCTGGAAGTATGCCCTGAGCCGAGGCGTGCATGGTTATG
Internal bar code:GCCTTAGGGGTGTAATTCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3862
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATGGGTCATTATCCGCC
Suggested primer 2:TCCGCACGTGGATCTCATTC