Insertion junction: CLIP2.071665_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071665
Chromosome:chromosome 2
Location:177306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074370 CDPK8 Calcium/calmodulin-dependent protein kinase; (1 of 18) K13412 - calcium-dependent protein kinase (CPK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATGGGACCCGGGTGTGGTTCAAGTGCTCGGCCCCACGGCGTGATGTC
Internal bar code:GTGGCAGCTTTAGTGGCCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1716
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCACTGTTGAAATTGCA
Suggested primer 2:GCTCCAAACTCTGAGCCGAT