Insertion junction: CLIP2.071671_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071671
Chromosome:chromosome 13
Location:80190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801505 (1 of 2) PTHR10642//PTHR10642:SF7 - RIBONUCLEASE H1 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTAATCGCAGTGGTGTTCAACGTAGGTCTGTTTAGAAGCGGAGCTC
Internal bar code:AGGGTGGCTAAGAGAGAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1384
LEAP-Seq percent confirming:86.0465
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGCTGCTACAAGTGTA
Suggested primer 2:CCTACGTCCACAACCGGTAG