Insertion junction: CLIP2.071676_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071676
Chromosome:chromosome 10
Location:465377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420900 HEL44 (1 of 1) K13181 - ATP-dependent RNA helicase DDX27 [EC:3.6.4.13] (DDX27, DRS1); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCACCTCACCGCTCACCTGTGCAGCTCACCCCGGTCCCCGTAGCCT
Internal bar code:CACGGGAGCGTATAAGCTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:988
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCTTACAAGTCCCGGC
Suggested primer 2:AACGTAGGAATGCCCGTTGT