Insertion junction: CLIP2.071682_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071682
Chromosome:chromosome 10
Location:25910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g417500 CYN20E,CYN20-5,CYN9 (1 of 1) PF00160//PF04969 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // CS domain (CS); Cyclophilin 20-5 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTATTGTGGCTGCACATTGAGCTGAACGCCTCATTGAAACATGTCGG
Internal bar code:CCGAGAGAGAGTCAGCTTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTACAGTGAACAGGCCC
Suggested primer 2:TTCACGTCTCGCCCCTTAAC