Insertion junction: CLIP2.071683_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071683
Chromosome:chromosome 9
Location:1529159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399350 FAP199 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGGCCCCTCCCCTTGGTGCTACACACACACACACACACACACACACA
Internal bar code:GATGTTATTACTAGGGTATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGCGCTACCTACAAAA
Suggested primer 2:AGGGTATTTGGAGTGGCTGC