Insertion junction: CLIP2.071684_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071684
Chromosome:chromosome 17
Location:1710464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708300 RPN12 (1 of 1) K03031 - 26S proteasome regulatory subunit N12 (PSMD8, RPN12); 26S proteasome regulatory subunit 3'UTR
Cre17.g708350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATGGTTCATGTTTCTGTAGCATATGGGCATATAACACTTGAGGGTTG
Internal bar code:AATTAGCCGGGTGAATGAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCAACAATTTTCGCACA
Suggested primer 2:TCACTCCCTTGTTCTCACGC