Insertion junction: CLIP2.071691_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071691
Chromosome:chromosome 9
Location:6349455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414350 (1 of 3) PF04824//PF04825 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) // N terminus of Rad21 / Rec8 like protein (Rad21_Rec8_N) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCCGCCCCTGGACCTGGACATGGGCTTGGAGTTCGGGCACCATGCC
Internal bar code:ATGTCCATCCTTTTAAGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1788
LEAP-Seq percent confirming:80.3922
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCCTGTAGTTCCAAGG
Suggested primer 2:AGTTCCAACAGTAGTGCCGG