Insertion junction: CLIP2.071698_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071698
Chromosome:chromosome 6
Location:6347897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGATCCAGGACCGCCGCGCCTGCACCTCCGCGGGGGAGACGTGGAAGC
Internal bar code:GTCCGGGATGAGCGACGCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5763
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATCGACGAGCAGGTAG
Suggested primer 2:TACGGCTCTGGGGAGATGAA