Insertion junction: CLIP2.071698_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071698
Chromosome:chromosome 6
Location:6347899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGGTGCGTCCACATGACAGCCATGCAGCTAGCCGCTGACGCCCCAAG
Internal bar code:GTCCGGGATGAGCGACGCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1481
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCTCTGGGGAGATGAA
Suggested primer 2:GGACATCGACGAGCAGGTAG