Insertion junction: CLIP2.071713_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071713
Chromosome:chromosome 13
Location:497140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565150 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAATGTGCGGGTTGGGTATGTCCGGCTGCCGGGGCACCATACACTGG
Internal bar code:TTGGGCGTATAGTGGTTATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2927
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAAAAGAACGACAGGC
Suggested primer 2:ACAAGAAGTACCAGCACCGG