Insertion junction: CLIP2.071718_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071718
Chromosome:chromosome 14
Location:3565122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630859 HID1 3-hydroxyisobutyrate dehydrogenase; (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGCCTCCAGTCATATCGCCTATACCTTTGGTAAAAATACATCTTGTT
Internal bar code:CCAATGATAAGGCATCGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1322
LEAP-Seq percent confirming:95.3125
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCGTGACTTGCAATTC
Suggested primer 2:TCGGAAGGCAGGCGTTTTAT