Insertion junction: CLIP2.071718_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071718
Chromosome:chromosome 14
Location:3565133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630859 HID1 3-hydroxyisobutyrate dehydrogenase; (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGCGTAAGCTTTCCGAAGCAAGGGCACGCGATCCAGCAACCGGCCG
Internal bar code:CCAATGATAAGGCATCGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGAAGGCAGGCGTTTTAT
Suggested primer 2:CCAGCCGTGACTTGCAATTC