Insertion junction: CLIP2.071724_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071724
Chromosome:chromosome 7
Location:544961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain intron
Cre07.g800770 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGTCGGCGATGGGGTACTCCGGGAAGGCGTGAGTTTTGGGTACAAAC
Internal bar code:GTGACACGACGGTGGGCAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3001
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:132
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:136

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCACCAGGACTGAGGTCG
Suggested primer 2:ACGACCATGAGCTGAGCAAA