Insertion junction: CLIP2.071725_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071725
Chromosome:chromosome 2
Location:2172279
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g089450 HRP5 Hydroxyproline-rich glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGAGTAGCCAGTCAGGACGATGCCGTACATGTGTTGCCCCGCTGAGT
Internal bar code:GATGGGGGCTGCCCAACCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:679
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATCTCTCTGGCCCAGGT
Suggested primer 2:TAAGCAAGCTAGGGATCGCG