Insertion junction: CLIP2.071735_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071735
Chromosome:chromosome 10
Location:3171721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441800 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGCTGTTTCTGAAACCACGCTCCCGAAGCTCTTGACGCCACGGGTC
Internal bar code:GGGGCGTATATCGCCAGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5275
LEAP-Seq percent confirming:95.1613
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGGGAAAAGTGGGCTGC
Suggested primer 2:GCGCTGCAAATTCAGACACA