Insertion junction: CLIP2.071748_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071748
Chromosome:chromosome 11
Location:2815036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801299 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCATGTACCCGTTCCTTTGCCGCACGCTTATTGACACCAGATCCTGCA
Internal bar code:CAAGACGCCTGGGCGATTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:914
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGCATCCCACGATTGC
Suggested primer 2:ACGTCAAGACCGTTCCTTCC