Insertion junction: CLIP2.071749_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071749
Chromosome:chromosome 1
Location:5055976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035150 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) 5'UTR
Cre01.g035200 (1 of 13) 2.3.1.225 - Protein S-acyltransferase / S-protein acyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGTCAGTATGTCACATAGAAGTACTTAGCATCAATGTTAAATTGCGA
Internal bar code:TTTACGATGAAGATGTTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2407
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGCAACAGCAAGGAA
Suggested primer 2:CATCTCCTGTCCCGGCATAC