Insertion junction: CLIP2.071751_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071751
Chromosome:chromosome 17
Location:2282607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713350 OMT1 (1 of 2) PTHR10283:SF76 - DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC; Oxoglutarate:malate antiporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCCCACTCACTGGCTTCCCTCAACAAGGCCAACTCCAATCCGGGGTG
Internal bar code:AGACGGTGCGCAAAAGCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4470
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCACGCCTCCTTATAC
Suggested primer 2:TTGCAGCAAACGGCATTGAA