Insertion junction: CLIP2.071753_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071753
Chromosome:chromosome 16
Location:791638
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g690700 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like 3'UTR
Cre16.g690750 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGGAGGAGGAGGAGGAGCATGAGGGGGTGGAGGAAGAGGACGAGGAG
Internal bar code:TAATCACCGGTGGTATCTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCCACACTACACCAC
Suggested primer 2:ACACACACACACACACACCT