Insertion junction: CLIP2.071756_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071756
Chromosome:chromosome 9
Location:3004026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393543 HCP2 (1 of 4) 1.7.99.1 - Hydroxylamine reductase / Hydroxylamine (acceptor) reductase; Hybrid-cluster protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCATTAACATACCGTACTGCTATTACCGTGCCACCAACAATACATTG
Internal bar code:TGTCTAGAAATGTCGCCGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4431
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTTTCCCCTTCACCTC
Suggested primer 2:GAAGGGACAGTCCGACCAAG