Insertion junction: CLIP2.071764_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071764
Chromosome:chromosome 17
Location:3510484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724350 POA5 20S proteasome alpha subunit E; (1 of 1) K02729 - 20S proteasome subunit alpha 5 (PSMA5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACGGCCCCAGCCCGCGTGTATCCCGGGGCATGCTGTCTTGAGGGCCAC
Internal bar code:TAAACATGTTGGCTGTAATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAACTGCTTGTGCGCTT
Suggested primer 2:AAAACGAGGCCATCTGCTGA