Insertion junction: CLIP2.071769_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071769
Chromosome:chromosome 17
Location:3425849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGCGAATGCAAGCAAGAGCAGGAAACGGTTTTGCGGCTGTGGGACGC
Internal bar code:GAAGTCGGGGTGTCATTTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4743
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTGGGTGTCAGGCCAAA
Suggested primer 2:TCAAGAACGAGCTGCGAACT