Insertion junction: CLIP2.071775_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071775
Chromosome:chromosome 12
Location:3778795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514450 SPL20 Pre-mRNA splicing factor; (1 of 1) K12829 - splicing factor 3B subunit 2 (SF3B2, SAP145, CUS1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCCGCGCTTAACAGATTTGAAAGCACACATGTGCATTGGTGCTGGAC
Internal bar code:ATGCAGGCGATTAACTCTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGGCTCACAGATTCCA
Suggested primer 2:TCAAACAGCAGGCCTCAGAG