Insertion junction: CLIP2.071776_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071776
Chromosome:chromosome 2
Location:8083136
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g144350 RJL1 Small Rab-related GTPase; (1 of 1) K19372 - DnaJ homolog subfamily C member 27 (DNAJC27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGCCACACTTCCTCGGCATTCGGTGGGCTAGTTGCTGGTTATGGGC
Internal bar code:TAGACGAAGCCGGTAATTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:92
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GACAATGCTGCCGGGAAATC
Suggested primer 2:CTATGCTCCGAGCTCTGTGG