Insertion junction: CLIP2.071777_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071777
Chromosome:chromosome 6
Location:3533677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800658 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTGTCTGGTTGGCCTGCTGCCTGCTGCACTAGTGCTTGATAGCTGG
Internal bar code:TCAGCTCGTGATATTGAGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1413
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GATACGAGCACTGAGGGACG
Suggested primer 2:CGCCCTGTTTGCATGTTGAA